CDS
| Accession Number | TCMCG006C30615 |
| gbkey | CDS |
| Protein Id | XP_022546025.1 |
| Location | join(24272207..24272210,24272287..24273375,24273442..24273971,24274045..24274152,24274228..24274328,24274436..24274526,24274609..24274719,24274819..24274884,24274970..24275029,24275145..24275702,24275789..24275923,24276035..24276151,24276269..24276331) |
| Gene | LOC106414339 |
| GeneID | 106414339 |
| Organism | Brassica napus |
Protein
| Length | 1010aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022690304.1 |
| Definition | eukaryotic translation initiation factor 5B-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Contains the following InterPro domains Small GTP-binding protein (InterPro IPR005225), Translation elongation factor EFTu EF1A, domain 2 (InterPro IPR004161), Translation initiation factor 2 related (InterPro IPR015760), Protein synthesis factor, GTP-binding (InterPro IPR000795) |
| KEGG_TC | - |
| KEGG_Module |
M00161
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko00194 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03012 [VIEW IN KEGG] |
| KEGG_ko |
ko:K02703
[VIEW IN KEGG] ko:K03243 [VIEW IN KEGG] |
| EC |
1.10.3.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00195
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko03013 [VIEW IN KEGG] map00195 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map03013 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATCGGAAGAACACGAGCGCGTGTAGAGGAGACGAAGATCATCCCTTTGCCTTGTCCTTCAAGGGAGGTGAAAACCCTAAGAATAAATCATATAATGTAAGGTTTGATCTGCTTGGTATTGAAGATTACAACGAAGAGGCAGAGGATGATGTTAATGTTGAATTGAGTGATGAGTTAATGCTTGGAAGACAAGTTACCGAAGAAACTAATAGTAAGAGTGAGGATCTTGGGGAAAACTCAAGGAGTAAGAAAAAGAAGAAGAACAAGAGTGGAAAGACTGCACATGAAGAAGAAGATTTGGACAAGATTCTTGCAGAACTTGGGATAACTCCTGTTTCACCAGCACAACCTGAACTAGTTGCACCTTCAGATTGCTCAAAGGATGGAGAAGAAGAGACTGTCCTGTCAGCTTCATCAAAGAAAAGGAAAAAGAAGAAGGACAAGGACAAGAAAGTGTCCGTGGAGGCTAAGGAGGAGCCATCACAGCACCAGAAGAAAGTTCCTAAACACATTCTAGAGATGCAAGAGATGGTTGCGCGGCGGAAAGAAGCTGAAGAGATGAAGAAGAAGGAAGAGGAAGAGAAGCTGAGGAAAGAGGAAGAGGAGCGACGCATTCAGGAAGAGCGAGAAAAGGAAGCTGAAGAGATTAAACAGAAGAGGAAGATTAGGGAAAAGGAGAAGATGCTGAAGAAGAAGCAAGAAGGAGGGATTCTTACAGAGAAGCAGAAGAGGGACAAGGCTTTCAAGAACAAGATGTTGTCTGATGCTGGAATGCTTCTTGCTTCAGACAAACATGGTGATTCCTCAAAGCGTCCCGTTTACGGCAACAAAAGAAAACCAGCTCGGACAAAAGCAAACGACTCTGGTTCTGTCCAGGTGAAAGATCATGCAAATGTAACAGCTAAGTTGCATGACATAGATTCAGCTGTCAAGGAAAAGAAACAAGAAGCTGGTGATGAGGAGGATGATTGGGAAGCAAAAAGTGATGATTCTGTTAATATAATGGGTGATTATGATGATGGGAAAGATGCACCTTGGCTTGTGGTTAAGAAAGAGATAAAAGACACTGCTGCAAAGGCCCATTGTTCAGGTCCTGTCACCTCTGATAGACTAGCATTGAAGTCTGAAGTTTCAGACAAGCCAAAAGAATCTAGACCTAAGGTGGATGATGCTACTAGGCCAAAGGATGCTACTAAAAGGGGTAATGACTCAGAAGTTAATGAAGTTGCTAAAGAAAGTCTTCGGTCTCCCATTTGCTGCATCATGGGCCACGTTGATACTGGTAAAACCAAGCTGTTGGACTGCATCAGAGGAACAAATGTTCAGGAAGGAGAAGCAGGAGGTATCACTCAGCAGATTGGTGCAACTTATTTCCCGGCAGAAAACATCCGTGAGAGGACCAAGGAGTTAAGACCTGATGCAAAACTCAAGGTGCCAGGTCTATTGGTTATTGATACGCCAGGACACGAGTCATTCTCAAATCTACGGTCAAGGGGTTCAAACTTGTGTGACATTGCAATTCTAGTGGTGGATATAATGCATGGTCTAGAGCCACAAACTATAGAGTCTCTTAATCTTTTGAGAAAGAGGAACACAGAGTTCATTGTTGCCTTGAATAAGGTGGATAGGCTATACGGGTGGAAAACATGCAAGAATGCTCCTATAGAGAAGGCTTTGGCACTGCAATCCAAAGATGTGGTTATTGAATTTAACATGAGGCTTACTCAGGTTATAACCCAGTTCAAAGAACAAGGACTCAACACTGAGATTTATTACAAGAACAAAGAAATGGGAGACACTTTCAGTATTGTGCCTACCAGTGCTATTAGTGGGGAAGGGATTCCAGATATGTTGCTATATTTGGTTATGTGGTCTCAAAAAACAATGGTTGAGAAACTTACATTTGTTGACAAACTGCAGTGTACCGTCCTTGAGGTCAAAGTTATTCCAGGCCATGGTACGACAATTGATGTTGTTCTGGTCAACGGTGTACTCCATGAAGGTGATCAAATCGTTGCTTGTGGGTCACAGGGACCAATTATAACAACTGTTAGATCATTATTGACTCCTCATCCTATGAAAGAGCTACGTGTGAAGGGTACATATCAGCATCATAGAGAAGTAAAGGCTGCGCAATGTATCAAGATAACTGCACAGGGCCTTGAACACGCCGTTGCTGGTACTTCCTTACATGTGATTGGACCTGATGTGGACGTGGACGAAGCCAAGAAAACAGCCATGGAAGATATGAAGTCAGTCATGAGCTTGGTTGACAAAAGTGGTGAAGGAGTTTACGTACAAGCTTCAACGTTAGGATCTTTGGAAGCATTACTAGAGTTCTTGAAGTCACCAGATGTAAAAATACCTGTAAGTGGTATTGGCCTAGGACCAGTGCATAAAAAGGATATCATGAAGGCCGGTGTAATGCTAGAGAACAAGAAAGAGTACGCTACGGTTTTGGCTTTTGACGTGAAGATAACTACTGAGGCTCGCGAACTAGCTGACAACATGGGAGTCAAGATCTTCTCCGCTGATATTATCTATCATCTGTTTGATCAGTTCAAGGGTTATGTCAAGGATGTCCGAGATGAAGAAAGGAAAGAAACAGCATCTGAAGTAGTGTTTCCATGTGTCCTTAAGATTTTACCAAACCATGTCTTCAAAAGAGGAAACCCAATCATCCTTGGAGTCGAGGTCATCGATGGTATACTCAAGGTTGGAACTCCCATGTGCTTTCTAAAAGAGATTGGGAAGTCGAGAGTGTTTGTGGATCTTGGTCGCGTTGCATCTATTCACAAAGACAAGAAGCCACTTGACGATGCCAAGAAAGGCCAGCAGGTTGCTATTAAGATCGTTGCCTCTAACCCTGGAGAAGAGAAAATGTTTGGGGAGAACTTTGATATAGAAGACGAGCTTGTCAGTCATATTTCTAGGAGATCCATCGACATACTCAAAACACTCTACAGGGATGAGTTGAAGAACGAGTTGAAGCTTGTTTTGAAACTTAAAATGTTGTTCAAGATACAATAG |
| Protein: MDRKNTSACRGDEDHPFALSFKGGENPKNKSYNVRFDLLGIEDYNEEAEDDVNVELSDELMLGRQVTEETNSKSEDLGENSRSKKKKKNKSGKTAHEEEDLDKILAELGITPVSPAQPELVAPSDCSKDGEEETVLSASSKKRKKKKDKDKKVSVEAKEEPSQHQKKVPKHILEMQEMVARRKEAEEMKKKEEEEKLRKEEEERRIQEEREKEAEEIKQKRKIREKEKMLKKKQEGGILTEKQKRDKAFKNKMLSDAGMLLASDKHGDSSKRPVYGNKRKPARTKANDSGSVQVKDHANVTAKLHDIDSAVKEKKQEAGDEEDDWEAKSDDSVNIMGDYDDGKDAPWLVVKKEIKDTAAKAHCSGPVTSDRLALKSEVSDKPKESRPKVDDATRPKDATKRGNDSEVNEVAKESLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELRPDAKLKVPGLLVIDTPGHESFSNLRSRGSNLCDIAILVVDIMHGLEPQTIESLNLLRKRNTEFIVALNKVDRLYGWKTCKNAPIEKALALQSKDVVIEFNMRLTQVITQFKEQGLNTEIYYKNKEMGDTFSIVPTSAISGEGIPDMLLYLVMWSQKTMVEKLTFVDKLQCTVLEVKVIPGHGTTIDVVLVNGVLHEGDQIVACGSQGPIITTVRSLLTPHPMKELRVKGTYQHHREVKAAQCIKITAQGLEHAVAGTSLHVIGPDVDVDEAKKTAMEDMKSVMSLVDKSGEGVYVQASTLGSLEALLEFLKSPDVKIPVSGIGLGPVHKKDIMKAGVMLENKKEYATVLAFDVKITTEARELADNMGVKIFSADIIYHLFDQFKGYVKDVRDEERKETASEVVFPCVLKILPNHVFKRGNPIILGVEVIDGILKVGTPMCFLKEIGKSRVFVDLGRVASIHKDKKPLDDAKKGQQVAIKIVASNPGEEKMFGENFDIEDELVSHISRRSIDILKTLYRDELKNELKLVLKLKMLFKIQ |